Senior Scientist Applications - Pathogen
The Ellison Institute of Technology (EIT) Oxford seeks a highly skilled and innovative Senior Scientist to join our Applications team, focused on developing cutting-edge diagnostic tests for infectious diseases. The role emphasizes metagenomics but also includes a range of sequencing and non-sequencing-based approaches. Ideal candidates will have strong experience with sequencing technologies and a proven track record of developing end-to-end clinical diagnostic applications in either academic or industrial environments. In this leadership position, you will manage a small, agile team to deliver prototype diagnostic assays in a fast-paced, start-up-like environment. Strong problem-solving, troubleshooting, and molecular biology skills are essential.
Overview
The Pathogen Mission highlights EIT's transformative approach, using Whole Genome Sequencing (WGS) and Oracle's cloud technology to create a global pathogen metagenomics system. This initiative aims to improve diagnostics, provide early epidemic warnings, and guide treatments by profiling antimicrobial resistance. The goal is to deliver certified diagnostic tools for widespread use in labs, hospitals, and public health. EIT Oxford fosters a culture of collaboration, innovation, and resilience, valuing diverse expertise to drive sustainable solutions to humanity's enduring challenges.
Key Responsibilities
* Research, design and prototype diagnostic assays for important infectious disease syndromes (e.g. respiratory tract infections) using the latest sequencing technologies (long and short read).
* Collaborate with internal and external stakeholders to identify innovative approaches to simplify and reduce time and cost of metagenomic diagnostic approaches, from sample collection to result.
* Automate diagnostic assays in partnership with experts to deliver cost-effective, easy-to-use tests.
* Work with AMR, informatics and machine learning colleagues to ensure tests provide accurate pathogen ID, AMR and relatedness results.
* Engage with industry and academic experts to identify and assess promising new technologies relevant to the team’s aims and objectives.
* Transfer working prototype designs to the verification and validation team and contribute to verification and validation experimental design.
* Build and lead a small team of scientists to deliver on team objectives.
Essential Knowledge, Skills, and Experience
* A PhD in a relevant scientific discipline (e.g. molecular biology, genomics, microbiology, or a related field).
* In-depth expertise in genomics and/or metagenomics.
* Strong foundation in molecular biology techniques and applications.
* Demonstrated experience in laboratory operations and personnel management.
* A proven track record of achievement in academic and/or industrial research settings.
* Hands-on experience in the design, development, and prototyping of molecular assays, particularly in areas such as infectious diseases, oncology, human genetics, plant or food pathogens, or veterinary diagnostics.
* Experience collaborating within multidisciplinary teams, with the ability to effectively communicate across scientific domains.
Desirable Knowledge, Skills, and Experience
* Background in microbiology and/or infectious diseases.
* Familiarity with clinical metagenomics applications and workflows.
* Foundational skills in bioinformatics, particularly in the analysis of genomic or metagenomic data.
Key Attributes
* Innovative thinker with a proactive approach to problem-solving and technology development.
* Strong troubleshooting skills, with the ability to identify and resolve complex technical issues.
* Highly organized, with excellent time management and prioritisation abilities.
* Effective communicator with strong presentation skills and a proven track record of delivering to diverse audiences.
* Demonstrated ability in technology horizon scanning and staying abreast of emerging scientific trends.
* Proven leadership skills, with experience guiding teams and driving projects to successful outcomes.
Benefits
* Salary: Competitive salary on offer
* Enhanced holiday pay
* Pension
* Life Assurance
* Income Protection
* Private Medical Insurance
* Hospital Cash Plan
* Therapy Services
* Perk Box
* Electrical Car Scheme
Why work for EIT
At the Ellison Institute, we believe a collaborative, inclusive team is key to our success. We are building a supportive environment where creative risks are encouraged, and everyone feels heard. Valuing emotional intelligence, empathy, respect, and resilience, we encourage people to be curious and to have a shared commitment to excellence. Join us and make an impact!
Terms of Appointment
You must have the right to work permanently in the UK with a willingness to travel as necessary. You will live in, or within easy commuting distance of, Oxford. During peak periods, some longer hours may be required and some working across multiple time zones due to the global nature of the programme.
Seniority level
* Mid-Senior level
Employment type
* Full-time
Job function
* Science
Industries
* IT Services and IT Consulting
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