The Role
The role is within the Human Developmental Biology Resource (HDBR; ), an MRC/Wellcome Trust funded fetal tissue bank enabling medical and scientific research. The role will involve contributing to the consenting of potential donors to the HDBR tissue bank; assisting with the annotation of anatomical structures and mapping gene expression data obtained from early human developmental tissues; and a laboratory-based role performing tasks associated with the normal functioning of the biobank, contributing to gene expression analyses as well as other duties required for the smooth running of the tissue bank. The consenting aspect of the role will take place in a hospital or clinical setting.
The is fixed term post until July 2028 and will require some working out of normal working hours.
The appointment will be made at grade F on the Newcastle University pay scale. For enquiries please contact (Newcastle HDBR Manager)
Key Accountabilities
Mapping gene expression data
1. Identify suitable experimental datasets for submission to the HDBR Atlas
gene expression database ().
2. Identify anatomical structures in tissue sections through developing human
tissues showing positive gene expression.
3. Add metadata to the HDBR gene expression data portal and submit entries
for review by HDBR Atlas editor.
4. Prepare data for submission to the Image Data Resource
(
Anatomical Annotation
5. Retrieve images, digitally process and clean images, storing in required
format and organisation.
6. Mark anatomical landmarks in microscope sections of various stages of early
human development for upload to the HDBR eHistology viewer
(.
7. Manually define anatomical regions in Amira and 3D modelling software for upload to the HDBR Atlas (
Taking consent from potential tissue bank donors
8. Facilitate the process of obtaining Informed Consent in line with local SOPs
and the principles of Good Clinical Practice (GCP) from a cohort of women
undergoing termination of pregnancy and document all activity accordingly.
9. Provide potential donors with the approved information to enable them to
decide if they wish to donate their products of conception to the HDBR tissue
bank and answer any queries they may have in regard to this decision.
10. Document all research activity in line with local SOPs and communicate
effectively and efficiently with the project management team and other
multidisciplinary staff involved in the project within the hospitals/clinics, the
university and funders
In House Gene Expression Service
11. Plan assigned projects as part of the HDBR’s In House Gene Expression Service (IHGES).
12. Conduct immunohistochemistry, tissue in situ hybridisation, or spatial transcriptomics experiments (10X Visium and Xenium) for the IHGES.
13. Assist with the interpretation and analysis of the results generated from the IHGES projects.
14. Assist in the preparation of reports and manuscripts for publication.
15. Communicate results and other complex specialist information to HDBR colleagues and to users of the resource.
16. Following suitable training, perform staging and dissections of human embryonic and fetal material.
Sample processing and Quality control
17. Process and paraffin wax embed tissue samples, archiving and cataloguing
for future experimental use
18. Section paraffin embedded and frozen tissues for histological preparations.
19. Maintain the HDBR digital slide collection and update data entries
20. Perform histological stains on a subset of sectioned slides
21. Extract nucleic acid (DNA and RNA) from a range of human embryonic and
fetal tissues
22. Carry out quality control procedures using immunohistochemistry, PCR, DNA
and RNA analysis
Other:
23. Liaise with clinical research staff at the donor recruitment centres to ensure
efficient tissue transfer from clinic to laboratory on a day-to-day basis.
24. Take an active lead in the training and supervision of students in the
laboratory and for basic administrative duties.
25. Presenting data or training at local group meetings to colleagues and
students.
26. Maintain stocks of consumables and reagents.
27. Carry out any other duties that are within the scope, spirit and purpose of the
job as requested by the HDBR Director or Manager.
28. Going about duties in a resource efficient way and minimising impacts to the
environment wherever possible.
The Person
Knowledge, Skills and Experience
29. Experience of consenting donors to clinical trials or REC approved research
studies
30. Experience of tissue biobanking
31. Excellent communication and interpersonal skills
32. Ability communicate effectively orally and in writing
33. Knowledge of mammalian embryology/anatomy
34. Experience of complex tissue dissections and the manual dexterity, care and
attention to detail required for dissection of delicate tissue samples
35. Previous experience of histopathological and/or molecular biology techniques
36. Knowledge of Human Tissue Act (HTA) regulations
37. Well-developed understanding of health and safety regulations and
procedures within a laboratory environment
38. Experience using databases to catalogue and retrieve data
Attributes and Behaviour
39. A team-worker with a customer-orientated, flexible approach to work
40. Ability to manage and prioritise own workload
41. Commitment to high quality, interdisciplinary research
42. The ability to make decisions under pressure
43. Motivated to achieve further training in human embryology and fetal
development
44. Willingness to work outside normal hours when necessary
Qualifications
BSc in a life science subject
Desirable
Post graduate qualification in a relevant subject
Newcastle University is a global University where everyone is treated with dignity and respect. As a University of Sanctuary, we aim to provide a welcoming place of safety for all, offering opportunities to people fleeing violence and persecution.
We are committed to being a fully inclusive university which actively recruits, supports and retains colleagues from all sectors of society. We value diversity as well as celebrate, support and thrive on the contributions of all of our employees and the communities they represent. We are proud to be an equal opportunities employer and encourage applications from individuals who can complement our existing teams, we believe that success is built on having teams whose backgrounds and experiences reflect the diversity of our university and student population.
At Newcastle University we hold a silver award in recognition of our good employment practices for the advancement of gender equality. We also hold a Bronze award in recognition of our work towards tackling race inequality in higher education REC. We are a employer and will offer an interview to disabled applicants who meet the essential criteria for the role as part of the offer and interview scheme.
In addition, we are a member of the Euraxess initiative supporting researchers in Europe.
Requisition ID: 28672